Difference between revisions of "DOI"

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== Scope ==
 
== Scope ==
 
* This wiki page summarises relevant facts about DOI and related persistent Identifiers (PID) for the OSGeo communities.  
 
* This wiki page summarises relevant facts about DOI and related persistent Identifiers (PID) for the OSGeo communities.  
−
* A DOI is a persistent identifier (PID).  
+
* A DOI is a [[Persistent_identifiers(pid)|persistent identifier (PID)]].  
 
* More infomation about PID for OSGeo is available  [https://wiki.osgeo.org/wiki/Persistent_identifiers(pid) here] in the wiki
 
* More infomation about PID for OSGeo is available  [https://wiki.osgeo.org/wiki/Persistent_identifiers(pid) here] in the wiki
  
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If you used the GitHub integration to archive your software on Zenodo, then we have already migrated and linked your records to support versioning."''
 
If you used the GitHub integration to archive your software on Zenodo, then we have already migrated and linked your records to support versioning."''
  
−
== Usage examples for people writing articles ==
+
== Usage examples to cite OSGeo projects by DOI in scientific publications (both Open Access and closed access) ==
  
 
=== DOI ===
 
=== DOI ===
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How to include a DOI-based reference to a LaTEX/Overleaf document.
 
How to include a DOI-based reference to a LaTEX/Overleaf document.
  
−
BEWARE: As of now (20230327) it remains to be confirmed that DOI-tags in citations work without the https://doi.org-header. This might (just) reuslt in human readable information, but not machine-readable.
+
BEWARE: As of now (2023-03-27) it remains to be confirmed that DOI-tags in citations work without the https://doi.org-header. This might (just) result in human readable information, but not machine-readable.
  
 
==== Publication DOI ====
 
==== Publication DOI ====
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==== Software Version DOI (a reference to a particular software release) ====
 
==== Software Version DOI (a reference to a particular software release) ====
  
−
@article{QGIS_Contributors_2022, title={QGIS},  
+
@article{QGIS_Contributors_2025, title={QGIS LTR 3.40.10},  
−
url={https://doi.org/10.5281/zenodo.5869837},  
+
url={https://doi.org/10.5281/zenodo.16881931},  
−
DOI={10.5281/ZENODO.5869837},   
+
DOI={10.5281/ZENODO.16881931},   
 
publisher={Zenodo},  
 
publisher={Zenodo},  
 
author={QGIS Contributors},  
 
author={QGIS Contributors},  
−
year={2022},  
+
year={2025},  
−
month={Jan} }
+
month={Aug} }
  
 +
== Added-value services based on DOI ==
  
 +
* [https://citation.crosscite.org/ Citation service by DataCite: Enter a DOI to create properly formatted references according to over 2400 citation styles for books, articles, etc.]
  
 +
== Personal due credit from DOI via ORCID ==
  
−
== Added-value services based on DOI ==
+
[https://orcid.org/ ORCID (Open Researcher and Contributor ID)] is a persistent identifier (PID) like DOI. It is used to identify a human person.
  
−
* [https://citation.crosscite.org/ Citation service by DataCite: Enter a DOI to create properly formatted references according to over 2400 citation styles for books, articles, etc.]
+
DOI and ORCID can be interlinked via the digital infrastructure services provided by the organisations DataCite and CrossRef.
  
 +
If a OSGeo-related software DOI is minted in Zenodo, the DataCite infrastructure can automatically forward and register this information in the ORCID accounts of the code authors. For this to work, two requirements are needed:
 +
# Code authors ORCIDs must be provided via the CITATION.cff file in the codebase.
 +
# A code author with an ORCID must have added Zenodo as a trusted organisation in the ORCID account settings, as [https://support.orcid.org/hc/en-us/articles/360006973893-Trusted-organizations described here.]
  
 +
Once a scientific publication is published (journal article, book, book chapter, etc.) and has received a publication DOI via CrossRef, this information can also be automatically forwarded to registered in ORCID. This requires, that CrossRef is added to the list of accepted parties in the ORCID account settings.
  
−
== DOI available for OSGeo Projects ==
+
== OSGeo Projects with DOI ==
−
 
 
−
{|
 
−
! style="text-align:left;"| OSGeo Project
 
−
! DOI
 
−
! First minted
 
−
! Citation example
 
−
! Integration Status
 
−
|-
 
−
|[https://doi.org/10.5281/zenodo.5879231 actinia]
 
−
|https://doi.org/10.5281/zenodo.5879231
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| automated
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5884351 GDAL]
 
−
| https://doi.org/10.5281/zenodo.5884351
 
−
| 2022
 
−
| [https://doi.org/10.1038/s41597-023-01929-2 Nature: Scientific data (2023)]
 
−
| automated
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.7976084 GeoMoose]
 
−
| https://doi.org/10.5281/zenodo.7976084
 
−
| 2023
 
−
| tbd
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/ZENODO.5881915 Geopaparazzi]
 
−
| https://doi.org/10.5281/ZENODO.5881915
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5854561 GeoServer]
 
−
| https://doi.org/10.5281/zenodo.5854561
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5854653 GeoTools]
 
−
| https://doi.org/10.5281/zenodo.5854653
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.3407865 GMT]
 
−
| https://doi.org/10.5281/zenodo.3407865
 
−
| 2019
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5176030 GRASS GIS]
 
−
| https://doi.org/10.5281/zenodo.5176030
 
−
| 2021
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| automated
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5849091 gvSIG]
 
−
| https://doi.org/10.5281/zenodo.5849091
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| manual upload
 
−
|-
 
−
| [https://doi.org/10.5281/ZENODO.5881778 Hortonmachine]
 
−
| https://doi.org/10.5281/ZENODO.5881778
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5888498 istSOS]
 
−
| https://doi.org/10.5281/zenodo.5888498
 
−
| 2022
 
−
| tbd
 
−
| manual
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5887014 Mapbender]
 
−
| https://doi.org/10.5281/zenodo.5887014
 
−
| 2022
 
−
| tbd
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5842012 MapServer]
 
−
| https://doi.org/10.5281/zenodo.5842012
 
−
| 2021
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5140318 MOSS]
 
−
| https://doi.org/10.5281/zenodo.5140318
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| automated
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5884641 OSGeoLive]
 
−
| https://doi.org/10.5281/zenodo.5884641
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5884859 OSGeoLive Documentation]
 
−
| https://doi.org/10.5281/zenodo.5884859
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5879631 PostGIS]
 
−
| https://doi.org/10.5281/zenodo.5879631
 
−
| 2021
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| manual upload
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5884394 PROJ]
 
−
| https://doi.org/10.5281/zenodo.5884394
 
−
| 2022
 
−
| [https://doi.org/10.3390/rs14153524 MDPI: Remote sensing (2022)]
 
−
| automated
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.7839119 pycsw]
 
−
| https://doi.org/10.5281/zenodo.7839119
 
−
| 2023
 
−
| tbd
 
−
| automated
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.7602922 pygeoapi]
 
−
| https://doi.org/10.5281/zenodo.7602922
 
−
| 2022
 
−
| tbd
 
−
| automated
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5869837 QGIS]
 
−
| https://doi.org/10.5281/zenodo.5869837
 
−
| 2022
 
−
| [https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2022GC010390 AGU:Geochemistry, Geophysics, Geosystems (2022)]
 
−
| manual upload
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.1040170 rasdaman]
 
−
| https://doi.org/10.5281/zenodo.1040170
 
−
| 2017
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| manual upload
 
−
|-
 
−
| [https://doi.org/10.5281/zenodo.5882070 SMASH]
 
−
| https://doi.org/10.5281/zenodo.5882070
 
−
| 2022
 
−
| [https://doi.org/10.1007/978-3-030-53125-6_30 Springer Handbook of Geographic Information (2022)]
 
−
| tbd
 
−
|-
 
−
!OSGeo projects with DOI
 
−
|
 
−
|'''23'''
 
−
|}
 
  
 +
The following citation listings for OSGeo projects are curated both manually and using automated data-harvesting from [https://www.crossref.org/ CrossRef]. The lists are currently updated at least once per year. The listings are not complete.
 +
The total number of scientific publications referencing OSGeo projects by their DOI is most likely much larger. Publications such as FOSS4G Proceedings in The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences are currently '''not''' referenced by CrossRef and must be added manually.
  
−
<Add your project DOI here, while maintaining alphabetical order>
+
=== OSGeo ===
  
−
== DOI-based Citations of OSGeo Projects in Scientific Literature ==
+
[https://zenodo.org/communities/osgeo Zenodo OSGeo Community: many Zenodo deposits related to OSGeo, citeable by DOI]
  
−
The following citation listings for OSGeo projects are curated both manually and using automated data-harvesting from [https://www.crossref.org/ CrossRef]. The list is currently updated annually. This listing is not complete.
+
[https://zenodo.org/communities/osgeo-open-geoscience Zenodo OSGeo Community: many Zenodo deposits related to the OSGeo Open Geoscience Initiative, citeable by DOI]
−
The total number of scientific publications referencing OSGeo projects by their DOI is most likely much larger. Publications such as FOSS4G Proceedings in The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences are currently '''not''' referenced by CrossRef and must be added manually.
 
  
−
=== actinia ===
+
=== actinia [[File:Actinia_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5879231 ]] ===
 +
DOI first minted: 2022
  
−
{| class="wikitable"
+
(search for this DOI on [https://scholar.google.com/scholar?hl=en&as_sdt=0%2C5&q=%2210.5281%2Fzenodo.5879231%22&btnG= Google Scholar])
 +
<!--
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
-->
 +
<!-- {| class="wikitable"
 
|+ Actinia: Software-DOI-based Citations
 
|+ Actinia: Software-DOI-based Citations
 
|-
 
|-
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| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
|}
 
|}
 +
-->
 +
=== eodash [[File:Eodash_DOI.png|220px |link=https://doi.org/10.5281/zenodo.6547058 ]]===
 +
DOI first minted: 2022
 +
 +
 +
 +
 +
=== GDAL [[File:Gdal_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5884351 ]] ===
 +
DOI first minted: 2022
 +
 +
 +
(search for this DOI on [https://scholar.google.com/scholar?hl=en&as_sdt=0%2C5&q=%2210.5281%2Fzenodo.5884351%22&btnG= Google Scholar])
  
−
=== GDAL ===
 
 
{| class="wikitable"
 
{| class="wikitable"
−
|+ GDAL: Software-DOI-based Citations
+
|+ GDAL: DOI-based citations by year
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
 
|-
 
|-
−
| 2024-01-23 || journal_article || American Geophysical Union (AGU) || Earth and Space Science || Mapping Daily Air Temperature Over the Hawaiian Islands From 1990 to 2021 via an Optimized Piecewise Linear Regression Technique || https://doi.org/10.1029/2023EA002851 || Source: Crossref
+
! Year !! Publications 
 
|-
 
|-
−
| 2024-01-02 || journal_article || Elsevier BV || Ecological Indicators || New approach to assess forest fragmentation based on multiscale similarity index || https://doi.org/10.1016/j.ecolind.2023.111530 || Source: Crossref
+
| 2025 || 10 (and counting)
 
|-
 
|-
−
| 2024-01-02 || journal_article || American Geophysical Union (AGU) || GeoHealth || Premature Deaths Due To Heat Exposure: The Potential Effects of Neighborhood‐Level Versus City‐Level Acclimatization Within US Cities || https://doi.org/10.1029/2023GH000970 || Source: Crossref
+
| 2024 || 18
 
|-
 
|-
−
| 2023-12-19 || journal_article || American Geophysical Union (AGU) || Earth and Space Science || High‐Resolution Maps of Near‐Surface Permafrost for Three Watersheds on the Seward Peninsula, Alaska Derived From Machine Learning || https://doi.org/10.1029/2023EA003015 || Source: Crossref
+
| 2023 || 9
 
|-
 
|-
−
| 2023-10-20 || journal_article || MDPI AG || Sensors || Comparing NISAR (Using Sentinel-1), USDA/NASS CDL, and Ground Truth Crop/Non-Crop Areas in an Urban Agricultural Region || https://doi.org/10.3390/s23208595 || Source: Crossref
+
| 2022 || 6
 
|-
 
|-
−
| 2023-07-29 || journal_article || Springer Science and Business Media LLC || Scientific Reports || First estimates of fine root production in tropical peat swamp and terra firme forests of the central Congo Basin || https://doi.org/10.1038/s41598-023-38409-x || Source: Crossref
+
| 2021 || 0
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Source: Crossref
 
−
|-
 
−
| 2023-04-19 || journal_article || Geomatik || Geomatik || Yersel referans verilerinin doğruluğunun çok zamanlı Sentinel-2 uydu görüntüleri ile araştırılması: Arpa ve Buğday örneği || https://doi.org/10.29128/geomatik.1210252 || Source: Crossref
 
−
|-
 
−
| 2023-03-28 || journal_article || Wiley || Crop Science || Endemic crop wild relatives in Chile towards the end of the 21st century: Protected areas and agricultural expansion || https://doi.org/10.1002/csc2.20962 || Source: Crossref
 
−
|-
 
−
| 2023-03-17 || journal_article || IOP Publishing || Environmental Research Communications || Validation of FABDEM, a global bare-earth elevation model, against UAV-lidar derived elevation in a complex forested mountain catchment || https://doi.org/10.1088/2515-7620/acc56d || Source: Crossref
 
−
|-
 
−
| 2023-01-20 || journal_article || Springer Science and Business Media LLC || Scientific Data || A 1.2 Billion Pixel Human-Labeled Dataset for Data-Driven Classification of Coastal Environments || https://doi.org/10.1038/s41597-023-01929-2 || Source: Crossref
 
−
|-
 
−
| 2022-11-08 || journal_article || MDPI AG || Remote Sensing || Assessing Changes in Boreal Vegetation of Kola Peninsula via Large-Scale Land Cover Classification between 1985 and 2021 || https://doi.org/10.3390/rs14215616 || Source: Crossref
 
−
|-
 
−
| 2022-10-10 || journal_article || Copernicus GmbH || Natural Hazards and Earth System Sciences || Automated snow avalanche release area delineation in data-sparse, remote, and forested regions || https://doi.org/10.5194/nhess-22-3247-2022 || Source: Crossref
 
−
|-
 
−
| 2022-06-27 || journal_article || MDPI AG || Sensors || A Novel Remote Sensing Image Registration Algorithm Based on Feature Using ProbNet-RANSAC || https://doi.org/10.3390/s22134791 || Source: Crossref
 
−
|-
 
−
| 2022-04-16 || journal_article || MDPI AG || Agronomy || Remote Sensing of Maize Plant Height at Different Growth Stages Using UAV-Based Digital Surface Models (DSM) || https://doi.org/10.3390/agronomy12040958 || Source: Crossref
 
−
|-
 
−
| 2022-02-23 || journal_article || Copernicus GmbH || Earth System Science Data || EcoDes-DK15: high-resolution ecological descriptors of vegetation and terrain derived from Denmark's national airborne laser scanning data set || https://doi.org/10.5194/essd-14-823-2022 || Source: Crossref
 
 
|}
 
|}
  
−
=== Geopaparazzi ===
+
[https://www.fair4g.org/gdal.html Latest Software-DOI-based citations report (FAIR4G project)]
−
{| class="wikitable"
+
 
−
|+ Geopaparazzi: Software-DOI-based Citations
+
 
−
|-
+
=== GeoNetwork [[File:Geonetwork_DOI.png|220px |link=https://doi.org/10.5281/zenodo.7924616 ]]===
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
+
DOI first minted: 2024
−
|-
+
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
+
 
−
|}
+
=== GeoMoose [[File:Geomoose_DOI.png|220px |link=https://doi.org/10.5281/zenodo.7976084 ]]===
 +
DOI first minted: 2023
 +
 
 +
 
 +
=== Geopaparazzi [[File:Geopaparazzi_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5881915 ]] ===
 +
DOI first minted: 2022
 +
 
 +
[https://www.fair4g.org/geopaparazzi.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 
 +
=== GEOS [[File:Geos_DOI.png|220px |link=https://doi.org/10.5281/zenodo.11396894 ]]===
 +
DOI first minted: 2023
 +
 
 +
[https://www.fair4g.org/geos.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 
 +
=== GeoServer [[File:Geoserver_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5854561 ]] ===
 +
DOI first minted: 2022
 +
 
 +
 
 +
[https://www.fair4g.org/geoserver.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 
 +
 
 +
=== GeoTools [[File:Geotools_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5854653 ]]===
 +
DOI first minted: 2022
 +
 
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
 
 +
=== GMT [[File:Gmt_DOI.png|220px |link=https://doi.org/10.5281/zenodo.3407865 ]]===
 +
DOI first minted: 2019
 +
 
 +
[https://www.fair4g.org/gmt.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 
 +
 
 +
 
 +
 
 +
 
 +
=== GRASS GIS [[File:Grass_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5176030 ]] ===
 +
DOI first minted: 2021
 +
(search for this DOI on [https://scholar.google.com/scholar?hl=en&as_sdt=0%2C5&q=%2210.5281%2Fzenodo.5176030%22&btnG= Google Scholar])
 +
 
 +
[https://zenodo.org/communities/grass Zenodo GRASS Community: many Zenodo deposits related to GRASS GIS, citeable by DOI]
 +
 
 +
[https://www.fair4g.org/grass.html Latest Software-DOI-based citations report (FAIR4G project)]
  
−
=== GeoServer ===
+
<!--
 
{| class="wikitable"
 
{| class="wikitable"
−
|+ Geoserver: Software-DOI-based Citations
+
|+ GRASS GIS: Software-DOI-based Citations
 
|-
 
|-
 
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source  
 
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source  
 
|-
 
|-
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
+
| 2024-10-25 || journal_article || Elsevier BV || Global Ecology and Conservation || Organisms with high dispersal ability as a proxy for biogeographical characterisation of the Mediterranean biome || https://doi.org/10.1016/j.gecco.2024.e03268 || Source: Crossref
−
|}
 
−
 
 
−
=== GeoTools ===
 
−
{| class="wikitable"
 
−
|+ GeoTools: Software-DOI-based Citations
 
 
|-
 
|-
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source  
+
| 2024-10-24 || journal_article || Elsevier BV || Geomorphology || Thousands of shallow, relict gullies indicate thermo-erosion on the sandy uplands of northern Lower Michigan during the Late Pleistocene || https://doi.org/10.1016/j.geomorph.2024.109482 || Source: Crossref
 
|-
 
|-
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
+
| 2024-05-03 || preprint article || online || SSRN || Organisms with High Dispersal Ability as a Proxy for Biogeographical Characterization of the Mediterranean Biome || https://doi.org/10.2139/ssrn.4815828 || Google Scholar
−
|}
 
−
=== GMT ===
 
−
{| class="wikitable"
 
−
|+ GMT: Software-DOI-based Citations
 
 
|-
 
|-
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
+
| 2024-09-01 || journal article || Elsevier || Ocean & Coastal Management || Looking for the surviving optimal areas for the threatened species Pinna nobilis in a highly anthropized coastal lagoon (Mar Menor, SE Spain) || https://doi.org/10.1016/j.ocecoaman.2024.107265 || Crossref
 
|-
 
|-
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
+
| 2024-05-23 || journal article || Cham: Springer Nature Switzerland || Earth Science, Systems and Society || Geochemical Pathways Defined by Predictive Regolith-Landform Models Using TanDEM-X Data in the Tanami Region, Australia || https://doi.org/10.3389/esss.2024.10111  || Crossref
−
|}
 
−
=== GRASS GIS ===
 
−
 
 
−
{| class="wikitable"
 
−
|+ GRASS GIS: Software-DOI-based Citations
 
 
|-
 
|-
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
+
| 2024-05-22 || journal article || Cham: Springer Nature Switzerland || International Symposium on Combinatorial Optimization || Optimal charging station location in a linear cycle path with deviations || https://doi.org/10.1007/978-3-031-60924-4_27 || Crossref
 
|-
 
|-
 
| 2022-08-24 || journal article || ISPRS Foundation || Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci. || OSGeo, persistent identifiers and the shape of things to come || https://doi.org/10.5194/isprs-archives-XLVIII-4-W1-2022-287-2022 || manual
 
| 2022-08-24 || journal article || ISPRS Foundation || Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci. || OSGeo, persistent identifiers and the shape of things to come || https://doi.org/10.5194/isprs-archives-XLVIII-4-W1-2022-287-2022 || manual
Line 348: Line 227:
 
| 2022-03-28 || journal article || Copernicus || EGU General Assembly 2022 || The new emerging DOI biotope within and around the Open Source Geospatial Foundation (OSGeo) || https://doi.org/10.5194/egusphere-egu22-5985 || manual
 
| 2022-03-28 || journal article || Copernicus || EGU General Assembly 2022 || The new emerging DOI biotope within and around the Open Source Geospatial Foundation (OSGeo) || https://doi.org/10.5194/egusphere-egu22-5985 || manual
 
|}
 
|}
 +
-->
 +
=== gvSIG [[File:Gvsig_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5849091| 2022 ]]===
 +
DOI first minted: 2022
 +
 +
<!--
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
-->
 +
 +
=== Hortonmachine [[File:Hortonmachine_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5881778]]===
 +
DOI first minted: 2022
  
−
=== gvSIG ===
+
<!--
−
{| class="wikitable"
+
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
−
|+ gvSIG: Software-DOI-based Citations
+
-->
−
|-
+
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
+
 
−
|-
+
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
+
=== istSOS [[File:Istsos_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5888498 ]]===
−
|}
+
DOI first minted: 2022
−
=== Hortonmachine ===
+
 
−
{| class="wikitable"
+
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
−
|+ Hortonmachine: Software-DOI-based Citations
+
 
−
|-
+
=== Leaflet [[File:Leaflet_DOI.png|220px |link=https://doi.org/10.5281/zenodo.7335489 ]] ===
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
+
DOI first minted: 2022
−
|-
+
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
+
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
−
|}
+
 
−
=== MapServer ===
+
=== Mapbender [[File:Mapbender_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5884351 ]]===
−
{| class="wikitable"
+
DOI first minted: 2022
−
|+ MapServer: Software-DOI-based Citations
+
 
−
|-
+
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
+
 
−
|-
+
=== MapServer [[File:MapServer-DOI-badge.png|link=https://doi.org/10.5281/zenodo.6994443 ]] ===
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
+
DOI first minted: 2021
−
|}
+
 
−
=== MOSS ===
+
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
−
{| class="wikitable"
+
 
 +
=== MovingPandas [[File:Movingpandas_DOI.png|220px |link=https://doi.org/10.5281/zenodo.3710950 ]]===
 +
DOI first minted: 2020
 +
 
 +
<!--
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
-->
 +
 
 +
=== MOSS [[File:Moss_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5140318 ]]===
 +
DOI first minted: 2022
 +
 
 +
[https://www.fair4g.org/moss.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 
 +
<!-- {| class="wikitable"
 
|+ MOSS: Software-DOI-based Citations
 
|+ MOSS: Software-DOI-based Citations
 
|-
 
|-
Line 387: Line 289:
 
| 2022-03-28 || Conference proceedings || Copernicus || EGU General Assembly 2021 || Raiders of the Lost Code: Preserving the MOSS Codebase - Significance, Status, Challenges and Opportunities  || https://doi.org/10.5194/egusphere-egu21-5492 || manual
 
| 2022-03-28 || Conference proceedings || Copernicus || EGU General Assembly 2021 || Raiders of the Lost Code: Preserving the MOSS Codebase - Significance, Status, Challenges and Opportunities  || https://doi.org/10.5194/egusphere-egu21-5492 || manual
 
|}
 
|}
 +
-->
 +
 +
=== Orfeo Toolbox [[File:Orfeo_DOI.png|220px |link=https://doi.org/10.5281/zenodo.2250562 ]]===
 +
DOI first minted: 2018
 +
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
=== OSGeoLive [[File:Osgeolive_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5884641 ]]===
 +
 +
DOI first minted: 2022
 +
<!--
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
-->
 +
 +
=== PDAL [[File:Pdal_DOI.png|220px |link=https://doi.org/10.5281/zenodo.2616780 ]]===
 +
DOI first minted: 2019
 +
 +
[https://www.fair4g.org/pdal.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
=== pgRouting [[File:Pgrouting_DOI.png|220px |link=https://doi.org/10.5281/zenodo.8382911 ]]===
 +
DOI first minted: 2023
 +
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
=== PostGIS [[File:Postgis_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5879631 ]]===
 +
DOI first minted: 2021
 +
 +
[https://www.fair4g.org/postgis.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
 +
=== PROJ [[File:Proj_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5884394 ]]===
 +
DOI first minted: 2022
 +
 +
[https://www.fair4g.org/proj.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
 +
 +
=== pycsw [[File:Pycsw_DOI.png|220px |link=https://doi.org/10.5281/zenodo.7839119 ]]===
 +
DOI first minted: 2023
 +
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
=== pygeoapi [[File:Pygeoapi_DOI.png|220px |link=https://doi.org/10.5281/zenodo.7602922 ]]===
 +
DOI first minted: 2022
 +
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
 +
=== QGIS [[File:QGIS_DOI.png|220px |link=https://doi.org/10.5281/zenodo.6139224]]===
 +
DOI first minted: 2022
 +
 +
[https://www.fair4g.org/qgis.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
 +
=== rasdaman [[File:Rasdaman_DOI.png|220px |link=https://doi.org/10.5281/zenodo.1040170 ]] ===
 +
DOI first minted: 2017
 +
 +
[https://www.fair4g.org/rasdaman.html Latest Software-DOI-based citations report (FAIR4G project)]
 +
 +
 +
 +
=== SMASH [[File:Smash_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5882070 ]]===
 +
DOI first minted: 2022
 +
 +
<!--
 +
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
 +
-->
  
−
=== OSGeoLive ===
 
−
{| class="wikitable"
 
−
|+ OSGeoLive: Software-DOI-based Citations
 
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
−
|}
 
−
=== OSGeoLive Documentation ===
 
−
{| class="wikitable"
 
−
|+ OSGeoLive Documentation: Software-DOI-based Citations
 
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
−
|}
 
−
=== PostGIS ===
 
−
{| class="wikitable"
 
−
|+ PostGIS: Software-DOI-based Citations
 
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
−
|}
 
  
 +
=== WRADLIB [[File:Wradlib_DOI.png|220px |link=https://doi.org/10.5281/zenodo.1209843 ]]===
 +
DOI first minted: 2021
  
−
=== PROJ ===
+
[https://www.fair4g.org/wradlib.html Latest Software-DOI-based citations report (FAIR4G project)]
  
 +
=== ZOO [[File:Zoo_DOI.png|220px |link=https://doi.org/10.5281/zenodo.5903685 ]]===
 +
DOI first minted: 2022
  
−
{| class="wikitable"
+
[https://www.fair4g.org/ Latest Software-DOI-based citations report (FAIR4G project)]
−
|+ PROJ: Software-DOI-based Citations
 
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
−
|-
 
−
| 2023-09-29 || journal_article || American Geophysical Union (AGU) || Geophysical Research Letters || Use of Shallow Ice Core Measurements to Evaluate and Constrain 1980–1990 Global Reanalyses of Ice Sheet Precipitation Rates || https://doi.org/10.1029/2023GL103943 || Source: Crossref
 
−
|-
 
−
| 2023-08-10 || journal_article || Institute of Electrical and Electronics Engineers (IEEE) || IEEE Transactions on Signal and Information Processing over Networks || Multivariate Time Series Forecasting With GARCH Models on Graphs || https://doi.org/10.1109/TSIPN.2023.3304142 || Source: Crossref
 
−
|-
 
−
| 2022-11-07 || journal_article || Seismological Society of America (SSA) || Seismological Research Letters || GrowClust3D.jl: A Julia Package for the Relative Relocation of Earthquake Hypocenters Using 3D Velocity Models || https://doi.org/10.1785/0220220193 || Source: Crossref
 
−
|-
 
−
| 2022-07-25 || journal_article || MDPI AG || Remote Sensing || An Efficient Global Scale Sentinel-1 Radar Backscatter and Interferometric Processing System || https://doi.org/10.3390/rs14153524 || Source: Crossref
 
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Source: Crossref
 
−
|}
 
  
−
=== QGIS ===
 
  
−
{| class="wikitable"
 
−
|+ QGIS: Software-DOI-based Citations
 
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
−
|-
 
−
| 2022-07-19 || journal_article || American Geophysical Union (AGU) || Geochemistry, Geophysics, Geosystems || Development of the Nyika Plateau, Malawi: A Long Lived Paleo‐Surface or a Contemporary Feature of the East African Rift? || https://doi.org/10.1029/2022GC010390 || Source: Crossref
 
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
−
|}
 
  
−
=== rasdaman ===
 
−
{| class="wikitable"
 
−
|+ rasdaman: Software-DOI-based Citations
 
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
−
|}
 
−
=== SMASH ===
 
−
{| class="wikitable"
 
−
|+ SMASH: Software-DOI-based Citations
 
−
|-
 
−
! Date !! Type !! Publisher !! Journal !! Title !! Publication DOI !! Source
 
−
|-
 
−
| 2022-06-24 || book_content || Springer Science and Business Media LLC || Springer Handbook of Geographic Information || Open Source – GIS || https://doi.org/10.1007/978-3-030-53125-6_30 || Crossref
 
−
|}
 
  
−
== Projects considering a DOI ==
 
−
# degree
 
−
# (NASA World Wind)
 
  
 +
<Add your project DOI here, while maintaining alphabetical order>
  
−
<Add your project here>
+
Hint: to automate the Zenodo integration, connect to it to GitHub (see above).
  
 
== DOI for datasets related to OSGeo  ==
 
== DOI for datasets related to OSGeo  ==
Line 473: Line 380:
 
This is an incomplete overview over geospatial data sources which can be referenced by DOI.
 
This is an incomplete overview over geospatial data sources which can be referenced by DOI.
 
Many more datasets are available in Open Access repositories such as [https://www.zenodo.org Zenodo]
 
Many more datasets are available in Open Access repositories such as [https://www.zenodo.org Zenodo]
 +
 
=== GRASS GIS ===
 
=== GRASS GIS ===
  
Line 511: Line 419:
 
   <a href="https://doi.org/10.5281/zenodo.5887014"><img src="https://zenodo.org/badge/DOI/10.5281/zenodo.5887014.svg" alt="DOI"></a>
 
   <a href="https://doi.org/10.5281/zenodo.5887014"><img src="https://zenodo.org/badge/DOI/10.5281/zenodo.5887014.svg" alt="DOI"></a>
  
 +
== DOI acknowledgement by Publishers and Journals ==
 +
 +
References in indexed scientific literature to research software, including the OSGeo software projects, can be counted as citations and due scientific credit for the persons developing and maintaining the research software).
  
−
== DOI acknowledgement by Publishers and Journals ==
+
The emerging best practice for software references is reference by DOI. Such a  DOI reference can either refer to the software project as a whole (concept DOI), or a particular release of the codebase (version DOI).
 +
 
 +
Keeping track of DOI-based software citations can both be done manually or by automated analysis of metadata about the publication provided centrally by CrossRef or DataCite.
 +
 
 +
The prerequisite for automated analysis and reporting (as in FA'''''I'''''R: machine-actionable and interoperable) is the provision of a full references list for the publication as a complete set of metadata to CrossRef.
 +
 
 +
If only a limited subset of the reference list is provided to CrossRef, metadata-based automated analysis and reporting will return no result, meaning no information about the citation.
 +
 
 +
In such a case, despite the best intentions by the publication authors by using DOI-based software citations in their publication, because of the lack of metadata, automated reporting will return no result and there will be no due credit by citation to the software project.
 +
 
 +
This also affects the software developer team, as there will be no credit / recognition of their roles as (research-)software authors, because there is no automated transitive credit to their individual ORCID accounts will be triggered.
 +
 
 +
 
 +
 
 +
Currently it is difficult at best for propective authors to assess prior to a publication whether software-references by DOI will be indexed by CrossRef, resulting in FAIR credit.
 +
 
 +
To mitigate this, incomplete lists are being compiled (below) of journals, for convenience of prospective authors, to assess wheter software-references will result in credit propagation to the software project and developer team.
 +
 
 +
* A greenlist collects journals and publications with confirmed software citations derived from CrossRef metadata.
  
−
Not all publishers and scientific journals forward DOI-references in a manner (CrossRef) which can be automatically harvested and reported.
+
* A whitelist compiles journals and publications with identical metadata practices to the greenlist, but where no DOI-based software citation has been confirmed yet.
  
−
As it is difficult at best for propective authors to be aware prior to a publication wether its (DOI)-refernces will be indexed by CrossRef.
+
* A greylist collects journals, where OSGeo-DOI have been used in publications, yet currently are not being indexed by CrossRef.
  
−
To mitigate this, an incomplete whitelist is being compiled (below) of journals, where CrossRef-indexing of OSGeo-DOI has been confirmed.
+
For scientific authors, the difference between a publication in a green-, whitelist or greylist journal is wether DOI-based references to OSGeo software, -data or -video will be automagically attributed ("due scientific credit") to the respective OSGeo community / persons. For greylist journals, such attribution needs to be compiled manually.
  
−
Likewise an incomplete greylist lists journals, where OSGeo-DOI have been used in publications, yet still are not indexed by CrossRef.
+
=== Publisher statements about software citation by DOI ===
  
−
For scientific authors, the difference between a publication in a whitelist or greylist journal is wether DOI-based references to OSGeo software, -data or -video will be automagically attributed ("due scientific credit") to the respective OSGeo community / persons. For greylist journals, such attribution needs to be compiled manually.
+
* [https://www.agu.org/Publish-with-AGU/Publish/Author-Resources/Data-and-Software-for-Authors American Geophysical Union (AGU): Data & Software for Authors]
 +
* [https://group.springernature.com/gp/group/media/press-releases/unified-code-sharing-policy-promoting-open-science/26789930 Springer Nature: Springer Nature announces unified open code policy to better support open research practices]
  
−
=== Whitelist: Journals and Publications reporting DOI references to CrossRef ===
+
=== Greenlist: Journals and Publications with confirmed CrossRef-listed software DOI references to OSGeo Projects ===
  
 
{| class="wikitable"
 
{| class="wikitable"
−
|+ Whitelist: Publications acknowledging DOI-based software citations
+
|+ Greenlist: Publications acknowledging DOI-based software citations (confirmed: 43 Journals as of 20250110)
 
|-
 
|-
 
! Publisher !! Journal / Publication  
 
! Publisher !! Journal / Publication  
Line 538: Line 468:
 
|-
 
|-
 
| American Geophysical Union (AGU)|| Geophysical Research Letters
 
| American Geophysical Union (AGU)|| Geophysical Research Letters
 +
|-
 +
| American Geophysical Union (AGU)|| Journal of Geophysical Research: Earth Surface
 +
|-
 +
| American Geophysical Union (AGU)|| Journal of Geophysical Research: Physics
 +
|-
 +
| American Geophysical Union (AGU)|| Journal of Geophysical Research: Planets
 +
|-
 +
| American Geophysical Union (AGU)|| Journal of Geophysical Research: Solid Earth
 +
|-
 +
| American Geophysical Union (AGU)|| Tectonics
 +
|-
 +
| American Geophysical Union (AGU)|| Water Resources Research
 +
|-
 +
| American Meteorological Society || Bulletin of the American Meteorological Society
 +
|-
 +
| Association for Computing Machinery (ACM) || Transactions on Spatial Algorithms and Systems
 
|-
 
|-
 
| Copernicus GmbH || Earth System Science Data  
 
| Copernicus GmbH || Earth System Science Data  
Line 543: Line 489:
 
| Copernicus GmbH || Natural Hazards and Earth System Sciences (EGU)
 
| Copernicus GmbH || Natural Hazards and Earth System Sciences (EGU)
 
|-
 
|-
−
| Elsevier BV || Ecological Indicators
+
| Copernicus GmbH || The Cryosphere
 +
|-
 +
| Elsevier || Agricultural Water Management
 +
|-
 +
| Elsevier || Ecological Indicators
 +
|-
 +
| Elsevier || Global Ecology and Conservation
 +
|-
 +
| Elsevier || Journal of Hydrology
 +
|-
 +
| Elsevier || Ocean & Coastal Management
 +
|-
 +
| Elsevier || Science of Remote Sensing
 +
|-
 +
| Elsevier || Sustainable Cities and Society
 
|-
 
|-
 
| Geomatik || Geomatik
 
| Geomatik || Geomatik
 +
|-
 +
| Informa UK Limited || Annals of GIS
 +
|-
 +
| Informa UK Limited || International Journal of Remote Sensing
 
|-
 
|-
 
| Institute of Electrical and Electronics Engineers (IEEE) || IEEE Transactions on Signal and Information Processing over Networks
 
| Institute of Electrical and Electronics Engineers (IEEE) || IEEE Transactions on Signal and Information Processing over Networks
 
|-
 
|-
 
| IOP Publishing || Environmental Research Communications
 
| IOP Publishing || Environmental Research Communications
 +
|-
 +
| McGill University Library and Archives || Seismica
 
|-
 
|-
 
| MDPI AG || Agronomy
 
| MDPI AG || Agronomy
Line 556: Line 522:
 
|-
 
|-
 
| MDPI AG || Sensors
 
| MDPI AG || Sensors
 +
|-
 +
| Oxford University Press (OUP) || Forestry: An International Journal of Forest Research
 +
|-
 +
| SAGE Publications || Environment and Planning B: Urban Analytics and City Science
 
|-
 
|-
 
| Seismological Society of America (SSA) || Seismological Research Letters
 
| Seismological Society of America (SSA) || Seismological Research Letters
 +
|-
 +
| Springer Nature Switzerland || Earth Science, Systems and Society
 +
|-
 +
| Springer Science and Business Media LLC || Landscape Ecology
 +
|-
 +
| Springer Science and Business Media LLC || Rules and Reasoning
 
|-
 
|-
 
| Springer Science and Business Media LLC || Springer Handbook Series  
 
| Springer Science and Business Media LLC || Springer Handbook Series  
Line 564: Line 540:
 
|-
 
|-
 
| Springer Science and Business Media LLC || Springer Scientific Data (Nature)
 
| Springer Science and Business Media LLC || Springer Scientific Data (Nature)
 +
|-
 +
| The Open Journal || Journal of Open Source Software
 +
|-
 +
| University of Toronto Press Inc. (UTPress) || Cartographica: The International Journal for Geographic Information and Geovisualization
 
|-
 
|-
 
| Wiley || Crop Science
 
| Wiley || Crop Science
 +
|}
 +
 +
=== Whitelist: Journals and Publications with CrossRef-enabled workflows to acknowledging DOI-based software citations (not yet confirmed but should apply) ===
 +
 +
 +
{| class="wikitable"
 +
|+ Whitelist: Publications with CrossRef-enabled workflows to acknowledging DOI-based software citations (not yet confirmed)
 +
|-
 +
! Publisher !! Journal / Publication
 +
|-
 +
| American Geophysical Union (AGU) || DOI-based software citations via CrossRef should work for ALL indexed peer-reviewed journals by AGU: A full references list is provided to CrossRef when an article is published (Sole exception: AGU Radio Science)
 +
|-
 +
| tbd || tbd
 
|}
 
|}
  
Line 576: Line 569:
 
| Copernicus GmbH || The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences
 
| Copernicus GmbH || The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences
 
|-
 
|-
 +
| American Geophysical Union (AGU) || EOS.org (note: EOS is a sceience news magazine published by AGU. It is not a indexed peer-reviewed journal)
 +
|-
 +
| Earth and Space Science Open Archive https://essopenarchive.org/ || Preprints, presentations from major scientific meetings, and important documents of scholarly societies (with DOI)
 
|}
 
|}
  
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* [https://zenodo.org/records/10054260 Why ROR ?]
 
* [https://zenodo.org/records/10054260 Why ROR ?]
 
* [https://zenodo.org/records/10055116 ROR Fact Sheet]
 
* [https://zenodo.org/records/10055116 ROR Fact Sheet]
−
 
  
 
=== ORCID (Open Researcher and Contributor ID) - a PID for people ===
 
=== ORCID (Open Researcher and Contributor ID) - a PID for people ===
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==== How to include ORCIDs to a LaTEX/Overleaf document ====
 
==== How to include ORCIDs to a LaTEX/Overleaf document ====
 +
 
Include these packages:
 
Include these packages:
 
\usepackage{orcidlink}
 
\usepackage{orcidlink}
 
\usepackage[hidelinks]{hyperref}
 
\usepackage[hidelinks]{hyperref}
−
 
−
 
  
 
\author{
 
\author{
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}
 
}
 
(Source: [https://doi.org/10.5194/isprs-archives-XLVIII-4-W1-2022-287-2022 OSGEO, PERSISTENT IDENTIFIERS AND THE SHAPE OF THINGS TO COME])
 
(Source: [https://doi.org/10.5194/isprs-archives-XLVIII-4-W1-2022-287-2022 OSGEO, PERSISTENT IDENTIFIERS AND THE SHAPE OF THINGS TO COME])
 +
 +
[[Category: Persistent identifiers]]

Latest revision as of 07:32, 3 October 2025

Digital Object Identifiers (DOI)

Scope

  • This wiki page summarises relevant facts about DOI and related persistent Identifiers (PID) for the OSGeo communities.
  • A DOI is a persistent identifier (PID).
  • More infomation about PID for OSGeo is available here in the wiki

Useful background information


Howto information for GitHub Repo maintainers (source Zenodo FAQ)

My organizational repository does not show up on the GitHub list

"In order to see and archive your organizational repositories on Zenodo you will need to have "Admin" permissions on said repository, either as an Admin of the organization or an Admin of one of your organization's repositories. Additionally, please make sure that the OAuth application on GitHub is granting permissions not only to your personal repositories but also to your organizational ones - to verify that go to your GitHub OAuth settings in your profile, and click on the Zenodo application to see more details. Make sure that Zenodo is given access (green tick) to your organization under "Organization access".

After that, navigate to your Zenodo GitHub settings page and click the "Sync now" button at the top."

I made a GitHub release, but it does not show up on Zenodo.

"Make sure the repository was enabled before the release was made, otherwise feel free to contact ZENODO."

Is it possible to archive a GitHub repository, before it was enabled on Zenodo?

"Only the repositories which were enabled before a release was made will be archived automatically. If you want to archive some of your old releases, you can always download a release ZIP from GitHub and upload it to Zenodo using our web interface as a regular upload."

How to change the default metadata for my GitHub releases?

"You can include metadata in a .zenodo.json file at the root of your GitHub repository. This file's contents should be in line with the Zenodo deposit metadata schema and will be used to update the metadata from future GitHub releases. For more information on how to create a .zenodo.json file, you can have a look at our GitHub integration documenation."

Do you support other software metadata files, like CITATION.cff or codemeta.json?

"Part of our plans and ongoing work is to take into account or improve our integration of other software metadata schemas such as the Citation File Format (CFF) and CodeMeta. We are working closely with our users and scholarly software and citation communities to figure out exactly when, in what form, and how all these different metadata schemas and their files will be integrated into Zenodo."

How does a CITATION.cff file affect the metadata of my GitHub release?

"When we find a CITATION.cff file in your GitHub repository's root folder, we make a best-effort attempt at parsing Zenodo-compatible metadata from it. For backwards-compatibility, if you have a .zenodo.json file in the repository, only the .zenodo.json's metadata will be taken into account. Of course, any existing valid CITATION.cff file will still be used to display the citation box on the GitHub repository page, but will not affect in any way the metadata we extract for your published release Zenodo record."

Do you support versioning for already existing records?

"Yes. However, for uploads published before the 30th of May 2017, you have to first upgrade your record to support versioning. This is done by clicking the “Upgrade to versioned record” button on the record page.

IMPORTANT If you have previously uploaded multiple versions of an upload as individual records on Zenodo, then DO NOT click the button to upgrade your record with versioning support. Please contact us so we can link the records under one versioning scheme.

Clicking the “Upgrade to versioned record” button on any of the records you would like to link, will irreversibly register them as individually-versioned records.

If you used the GitHub integration to archive your software on Zenodo, then we have already migrated and linked your records to support versioning."

Usage examples to cite OSGeo projects by DOI in scientific publications (both Open Access and closed access)

DOI

How to include a DOI-based reference to a LaTEX/Overleaf document.

BEWARE: As of now (2023-03-27) it remains to be confirmed that DOI-tags in citations work without the https://doi.org-header. This might (just) result in human readable information, but not machine-readable.

Publication DOI

@article{Chen_2003_Giants, title={On the Shoulders of Giants}, url={\url{https://doi.org/10.1007/978-1-4471-0051-5_5}}, DOI={10.1007/978-1-4471-0051-5_5}, journal={Mapping Scientific Frontiers: The Quest for Knowledge Visualization}, publisher={Springer London}, author={Chen, Chaomei}, year={2003}, pages={135–166} }

Video DOI

@article{Inman_1987, title={GRASS}, url={https://av.tib.eu/media/12963}, DOI={10.5446/12963}, abstractNote={Video presentation explaining the features and capabilities of this computer-based mapping system.}, publisher={Moving Pictures, US Army Construction Engineering Research Laboratory}, author={Inman, Roger J.}, year={1987}, language={en} }

Software Concept DOI (a reference to a software project as a whole)

@article{GRASS_CONCEPT_DOI, title={OSGeo/grass: GRASS GIS 8.2.0}, url={https://zenodo.org/record/5176030}, DOI={10.5281/ZENODO.5176030}, abstractNote={ .. CONTENT OMMITTED FOR BREVITY ..}, year={2022}, month={Jun} }

Software Version DOI (a reference to a particular software release)

@article{QGIS_Contributors_2025, title={QGIS LTR 3.40.10}, url={https://doi.org/10.5281/zenodo.16881931}, DOI={10.5281/ZENODO.16881931}, publisher={Zenodo}, author={QGIS Contributors}, year={2025}, month={Aug} }

Added-value services based on DOI

Personal due credit from DOI via ORCID

ORCID (Open Researcher and Contributor ID) is a persistent identifier (PID) like DOI. It is used to identify a human person.

DOI and ORCID can be interlinked via the digital infrastructure services provided by the organisations DataCite and CrossRef.

If a OSGeo-related software DOI is minted in Zenodo, the DataCite infrastructure can automatically forward and register this information in the ORCID accounts of the code authors. For this to work, two requirements are needed:

  1. Code authors ORCIDs must be provided via the CITATION.cff file in the codebase.
  2. A code author with an ORCID must have added Zenodo as a trusted organisation in the ORCID account settings, as described here.

Once a scientific publication is published (journal article, book, book chapter, etc.) and has received a publication DOI via CrossRef, this information can also be automatically forwarded to registered in ORCID. This requires, that CrossRef is added to the list of accepted parties in the ORCID account settings.

OSGeo Projects with DOI

The following citation listings for OSGeo projects are curated both manually and using automated data-harvesting from CrossRef. The lists are currently updated at least once per year. The listings are not complete. The total number of scientific publications referencing OSGeo projects by their DOI is most likely much larger. Publications such as FOSS4G Proceedings in The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences are currently not referenced by CrossRef and must be added manually.

OSGeo

Zenodo OSGeo Community: many Zenodo deposits related to OSGeo, citeable by DOI

Zenodo OSGeo Community: many Zenodo deposits related to the OSGeo Open Geoscience Initiative, citeable by DOI

actinia Actinia DOI.png

DOI first minted: 2022

(search for this DOI on Google Scholar)

eodash Eodash DOI.png

DOI first minted: 2022



GDAL Gdal DOI.png

DOI first minted: 2022


(search for this DOI on Google Scholar)

GDAL: DOI-based citations by year
Year Publications
2025 10 (and counting)
2024 18
2023 9
2022 6
2021 0

Latest Software-DOI-based citations report (FAIR4G project)


GeoNetwork Geonetwork DOI.png

DOI first minted: 2024


GeoMoose Geomoose DOI.png

DOI first minted: 2023


Geopaparazzi Geopaparazzi DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)

GEOS Geos DOI.png

DOI first minted: 2023

Latest Software-DOI-based citations report (FAIR4G project)

GeoServer Geoserver DOI.png

DOI first minted: 2022


Latest Software-DOI-based citations report (FAIR4G project)


GeoTools Geotools DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)

GMT Gmt DOI.png

DOI first minted: 2019

Latest Software-DOI-based citations report (FAIR4G project)



GRASS GIS Grass DOI.png

DOI first minted: 2021 (search for this DOI on Google Scholar)

Zenodo GRASS Community: many Zenodo deposits related to GRASS GIS, citeable by DOI

Latest Software-DOI-based citations report (FAIR4G project)

gvSIG 2022

DOI first minted: 2022


Hortonmachine Hortonmachine DOI.png

DOI first minted: 2022



istSOS Istsos DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)

Leaflet Leaflet DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)

Mapbender Mapbender DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)

MapServer MapServer-DOI-badge.png

DOI first minted: 2021

Latest Software-DOI-based citations report (FAIR4G project)

MovingPandas Movingpandas DOI.png

DOI first minted: 2020


MOSS Moss DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)


Orfeo Toolbox Orfeo DOI.png

DOI first minted: 2018

Latest Software-DOI-based citations report (FAIR4G project)

OSGeoLive Osgeolive DOI.png

DOI first minted: 2022

PDAL Pdal DOI.png

DOI first minted: 2019

Latest Software-DOI-based citations report (FAIR4G project)

pgRouting Pgrouting DOI.png

DOI first minted: 2023

Latest Software-DOI-based citations report (FAIR4G project)

PostGIS Postgis DOI.png

DOI first minted: 2021

Latest Software-DOI-based citations report (FAIR4G project)


PROJ Proj DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)


pycsw Pycsw DOI.png

DOI first minted: 2023

Latest Software-DOI-based citations report (FAIR4G project)

pygeoapi Pygeoapi DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)


QGIS QGIS DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)


rasdaman Rasdaman DOI.png

DOI first minted: 2017

Latest Software-DOI-based citations report (FAIR4G project)


SMASH Smash DOI.png

DOI first minted: 2022


WRADLIB Wradlib DOI.png

DOI first minted: 2021

Latest Software-DOI-based citations report (FAIR4G project)

ZOO Zoo DOI.png

DOI first minted: 2022

Latest Software-DOI-based citations report (FAIR4G project)



<Add your project DOI here, while maintaining alphabetical order>

Hint: to automate the Zenodo integration, connect to it to GitHub (see above).

DOI for datasets related to OSGeo

This is an incomplete overview over geospatial data sources which can be referenced by DOI. Many more datasets are available in Open Access repositories such as Zenodo

GRASS GIS

  1. Spearfish Dataset for GRASS GIS v4.x - v8.x https://doi.org/10.5281/zenodo.7930522
  2. New Orleans Dataset for GRASS GIS https://doi.org/10.5281/zenodo.3359642
  3. Hilltop Arboretum Landform Dataset for GRASS GIS https://doi.org/10.5281/zenodo.3749397
  4. Sichuan Dataset for GRASS GIS https://doi.org/10.5281/zenodo.3359645
  5. The Hills of Governor's Island Dataset for GRASS GIS https://doi.org/10.5281/zenodo.5248688
  6. Louisiana Dataset for GRASS GIS https://doi.org/10.5281/zenodo.3359620
  7. Natural Earth Dataset for GRASS GIS https://doi.org/10.5281/zenodo.3968936
  8. Global Dataset for GRASS GIS https://doi.org/10.5281/zenodo.3359632
  9. Governor's Island Dataset for GRASS GIS https://doi.org/10.5281/zenodo.5248419

(add datasets here)

QGIS

  1. Governor's Island Dataset for QGIS https://doi.org/10.5281/zenodo.5701115
  2. Louisiana Dataset for QGIS https://doi.org/10.5281/zenodo.3359620

(add datasets here)

DOI for OSGeo Video Recordings

add your DOI badge to your project pages

  • please add your DOI badge to your project

See Example Mapbender

You badge looks like this (replace your DOI in the Link and svg name) 

 <a href="https://doi.org/10.5281/zenodo.5887014"><img src="https://zenodo.org/badge/DOI/10.5281/zenodo.5887014.svg" alt="DOI"></a>

DOI acknowledgement by Publishers and Journals

References in indexed scientific literature to research software, including the OSGeo software projects, can be counted as citations and due scientific credit for the persons developing and maintaining the research software).

The emerging best practice for software references is reference by DOI. Such a DOI reference can either refer to the software project as a whole (concept DOI), or a particular release of the codebase (version DOI).

Keeping track of DOI-based software citations can both be done manually or by automated analysis of metadata about the publication provided centrally by CrossRef or DataCite.

The prerequisite for automated analysis and reporting (as in FAIR: machine-actionable and interoperable) is the provision of a full references list for the publication as a complete set of metadata to CrossRef.

If only a limited subset of the reference list is provided to CrossRef, metadata-based automated analysis and reporting will return no result, meaning no information about the citation.

In such a case, despite the best intentions by the publication authors by using DOI-based software citations in their publication, because of the lack of metadata, automated reporting will return no result and there will be no due credit by citation to the software project.

This also affects the software developer team, as there will be no credit / recognition of their roles as (research-)software authors, because there is no automated transitive credit to their individual ORCID accounts will be triggered.


Currently it is difficult at best for propective authors to assess prior to a publication whether software-references by DOI will be indexed by CrossRef, resulting in FAIR credit.

To mitigate this, incomplete lists are being compiled (below) of journals, for convenience of prospective authors, to assess wheter software-references will result in credit propagation to the software project and developer team.

  • A greenlist collects journals and publications with confirmed software citations derived from CrossRef metadata.
  • A whitelist compiles journals and publications with identical metadata practices to the greenlist, but where no DOI-based software citation has been confirmed yet.
  • A greylist collects journals, where OSGeo-DOI have been used in publications, yet currently are not being indexed by CrossRef.

For scientific authors, the difference between a publication in a green-, whitelist or greylist journal is wether DOI-based references to OSGeo software, -data or -video will be automagically attributed ("due scientific credit") to the respective OSGeo community / persons. For greylist journals, such attribution needs to be compiled manually.

Publisher statements about software citation by DOI

Greenlist: Journals and Publications with confirmed CrossRef-listed software DOI references to OSGeo Projects

Greenlist: Publications acknowledging DOI-based software citations (confirmed: 43 Journals as of 20250110)
Publisher Journal / Publication
American Geophysical Union (AGU) Earth and Space Science
American Geophysical Union (AGU) Geochemistry, Geophysics, Geosystems
American Geophysical Union (AGU) GeoHealth
American Geophysical Union (AGU) Geophysical Research Letters
American Geophysical Union (AGU) Journal of Geophysical Research: Earth Surface
American Geophysical Union (AGU) Journal of Geophysical Research: Physics
American Geophysical Union (AGU) Journal of Geophysical Research: Planets
American Geophysical Union (AGU) Journal of Geophysical Research: Solid Earth
American Geophysical Union (AGU) Tectonics
American Geophysical Union (AGU) Water Resources Research
American Meteorological Society Bulletin of the American Meteorological Society
Association for Computing Machinery (ACM) Transactions on Spatial Algorithms and Systems
Copernicus GmbH Earth System Science Data
Copernicus GmbH Natural Hazards and Earth System Sciences (EGU)
Copernicus GmbH The Cryosphere
Elsevier Agricultural Water Management
Elsevier Ecological Indicators
Elsevier Global Ecology and Conservation
Elsevier Journal of Hydrology
Elsevier Ocean & Coastal Management
Elsevier Science of Remote Sensing
Elsevier Sustainable Cities and Society
Geomatik Geomatik
Informa UK Limited Annals of GIS
Informa UK Limited International Journal of Remote Sensing
Institute of Electrical and Electronics Engineers (IEEE) IEEE Transactions on Signal and Information Processing over Networks
IOP Publishing Environmental Research Communications
McGill University Library and Archives Seismica
MDPI AG Agronomy
MDPI AG Remote Sensing
MDPI AG Sensors
Oxford University Press (OUP) Forestry: An International Journal of Forest Research
SAGE Publications Environment and Planning B: Urban Analytics and City Science
Seismological Society of America (SSA) Seismological Research Letters
Springer Nature Switzerland Earth Science, Systems and Society
Springer Science and Business Media LLC Landscape Ecology
Springer Science and Business Media LLC Rules and Reasoning
Springer Science and Business Media LLC Springer Handbook Series
Springer Science and Business Media LLC Springer Scientific Reports (Nature)
Springer Science and Business Media LLC Springer Scientific Data (Nature)
The Open Journal Journal of Open Source Software
University of Toronto Press Inc. (UTPress) Cartographica: The International Journal for Geographic Information and Geovisualization
Wiley Crop Science

Whitelist: Journals and Publications with CrossRef-enabled workflows to acknowledging DOI-based software citations (not yet confirmed but should apply)

Whitelist: Publications with CrossRef-enabled workflows to acknowledging DOI-based software citations (not yet confirmed)
Publisher Journal / Publication
American Geophysical Union (AGU) DOI-based software citations via CrossRef should work for ALL indexed peer-reviewed journals by AGU: A full references list is provided to CrossRef when an article is published (Sole exception: AGU Radio Science)
tbd tbd

Greylist: Journals and Publications reporting DOI references to CrossRef

Greylist: Publications not yet acknowledging DOI-based software citations
Publisher Journal / Publication
Copernicus GmbH The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences
American Geophysical Union (AGU) EOS.org (note: EOS is a sceience news magazine published by AGU. It is not a indexed peer-reviewed journal)
Earth and Space Science Open Archive https://essopenarchive.org/ Preprints, presentations from major scientific meetings, and important documents of scholarly societies (with DOI)

Related Identifiers

Research Organisiation Registry (ROR): An ID for the OSGeo Foundation

ROR is a global, community-led registry of open persistent identifiers for research organizations.

OSGeo ROR

The OSGeo Foundation is a research organisation.

The ROR ID for OSGeo is https://ror.org/00cjqbk89

Usage of ROR

Many scholarly communication systems are already using ROR, and many others are working on integrating ROR.

Background Information (ROR Community) =

ORCID (Open Researcher and Contributor ID) - a PID for people

Authentice an ORCID account with a GitHub

„We’re excited to announce that GitHub is partnering with ORCID. You can now authenticate your ORCID account with your GitHub account, and display your ORCID iD on your public GitHub profile. ORCID provides a persistent unique digital identifier (an ORCID iD) that researchers own and control, and that distinguishes them from every other researcher."

https://github.blog/changelog/2024-03-13-authenticate-orcid-id/

How to include ORCIDs to a LaTEX/Overleaf document

Include these packages: \usepackage{orcidlink} \usepackage[hidelinks]{hyperref}

\author{ Peter Löwe\,\orcidlink{0000-0003-2257-0517}~\textsuperscript{1}\thanks{Corresponding author}, Markus Neteler\,\orcidlink{0000-0003-1916-1966}~\textsuperscript{2} } (Source: OSGEO, PERSISTENT IDENTIFIERS AND THE SHAPE OF THINGS TO COME)

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